As sea water sits in a hose for long periods, between the head being used, it breaks down and starts to smell bad. This is another kind of stink and No Fecal matter is required. In other words, even a head with a completely empty holding tank or even one which directly discharges without use of a holding tank, can stink. This foul odor problem is more of an issue in summertimes as warm water temperature promotes the decay of organic matter in sea water. Once the oxygen in the seawater is depleted by aerobic decomposition, the anaerobic bacteria will get to work producing smelly hydrogen sulphide as a byproduct.
Flushing with the intake line with fresh water will eliminates the sea water odor problem. One way to do this is to eliminate a separate sink drain seacock and tee the sink drain hose into the head inlet seacock. Both the sink drain and head water inlet will work fine. When leaving the boat for an extended time, flush the head intake line using fresh water from the sink. Just close the seacock, add water to the sink, and flush the head.
This is actually the method suggested by Peggie Hall, The Head Mistress. A rare issue to be aware of, there could be a concern about dropping large debris in the head sink drain as it could clog the internal head pump valve. This problem can be nearly eliminated by use of a sink strainer and/or by plumbing the drain straight to the seacock and using a 90 degree tee at the seacock for the head water inlet. In the later option, any heavy debris will fall straight out of the seacock thru-hull.